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Identifier 000454274
Title Diagnostic markers of skeleton ontogenetic deviations in zebrafish Danio rerio (Hamilton 1822)
Alternative Title Διαγνωστικοί δείκτες σκελετικών οντογενετικών αποκλίσεων του zebrafish Danio rerio (Hamilton 1822)
Author Καραγιάννη, Σουλτάνα Γ.
Thesis advisor Κουμουνδούρος, Γεώργιος
Reviewer Κεντούρη, Μαρουδιώ
Mazurais, David
Abstract Skeletal deformities are a significant issue for aquaculture, with negative impacts on fish biological performance (swimming, respiration etc.), phenotypic quality and welfare. Their appearance is attributed to both environmental (temperature, pH etc) and genetic factors. Identifying accurate diagnostic markers linked to deviations of skeletogenesis and development of skeletal deformities, could offer powerful tools to the research on the causative factors of abnormalities as well to the commercial hatcheries. In the present study we used zebrafish as a model species to test whether particular skeletal defects can be associated with the expression of genes involved in bone formation and resorption. Primarily we focused on kyphosis, since it can be easily distinguished macroscopically, it is frequent among rearing species and known to induce high mortality rates. Zebrafish was chosen because of its similar ontogenetic pattern to that of the most fish species, its well-characterized skeletal development, easy maintenance, short life cycle and well-studied genome. Also, it is known how to at-will cause skeletal deformities, allowing the examination of their development. Two groups of fish were reared in triplicate, under two different feeding regimes; one standard (control, with combined use of Artemia nauplii and dry feed), and another one (D, with dry feed only) which has been associated with elevated rates of skeletal defects. Skeletal analysis verified the initial hypothesis on the effect of the tested regimes on the development of skeletal abnormalities, with D group presenting significantly elevated abnormality rates (p<0.05, G-test). The significance effect of feeding regimes was observed in the case of the abnormal branchiostegal rays (10±9% in the control group vs 42 ±12% in the D group, mean ±SD), bended neural processes (10±8% at the Control group vs 47±8% at the D group), abnormal gill cover (4±3 % in the control vs 25±4 % in the D group) and caudal-peduncle scoliosis (6±4 % in the control vs 23±3 % in the D group). In addition to the bibliographically expected abnormalities, D group presented high rates of abnormal vertebral ossification pattern, in the form of resorption lacunae and irregular bone formation (4±2 % in the control vs 34±32 % in the D group). Calcein staining of the specimens that were collected during an additional fourth experimental replicate showed that vertebral abnormalities can be easily detected, on alive larvae, at the beginning of their formation; well before they are expressed on the external phenotype. In the case of resorption lacunae, they were first detected on specimens of ca 6.0 mm SL. QPCR analysis did not reveal significant difference in transcript levels between the two experimental groups for the most of the studied genes (bglap, col1a1a, acp5a, runx2b, mmp13a). In the case of Sp7 gene a significantly different expression level (p<0.05, Kruskal-Wallis) was found between the control (0.45±0.09SE) and D group (0.84±0.11SE). Our results on gene expression differentiation between the two experimental groups are discussed in association to the potential causative factors and critical ontogenetic windows of the observed skeletal abnormalities.
Language English
Subject Descriptors
Genes
Predictors
Skeletal deformities
Γονίδια
Προγνωστικά
Σκελετικές παραμορφώσεις
Issue date 2023-03-24
Collection   School/Department--School of Sciences and Engineering--Department of Biology--Post-graduate theses
  Type of Work--Post-graduate theses
Permanent Link https://elocus.lib.uoc.gr//dlib/3/4/0/metadata-dlib-1678694615-411866-30428.tkl Bookmark and Share
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